Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8333

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8332: 16700 - K10082 LMAN2, VIP36 lectin, mannose-binding 2, at 956796 to 958192 16700 mRNA_8333: 16701 - SUPERFAMILY--SSF55781, at 958557 to 960459 16701 mRNA_8334: 16702 - BLAST mtf1_muccl ame full transcription factor mtf1 [Licht..., at 961362 to 964238 16702

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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957,654 - 16700 mRNA_8332 0.61 0.3
957,795 - 16700 mRNA_8332 0.72 -0.1
957,912 + 16700 mRNA_8332 0.80 1.9
957,915 - 16700 mRNA_8332 0.80 0.1
958,060 - 1.3
958,061 + 0.3
958,066 - -1.6
958,087 + -0.2
958,147 - 0.4
958,230 + -0.2
958,231 - -0.0
958,359 - -0.0
958,384 - -0.2
958,385 + 0.6
958,485 - -0.2
958,669 - 0.1
958,670 + -1.2
958,833 + 16701 mRNA_8333 0.15 -0.1
959,139 - 16701 mRNA_8333 0.31 -1.1
959,263 + 16701 mRNA_8333 0.37 -0.5
960,148 + 16701 mRNA_8333 0.84 0.0
960,155 - 16701 mRNA_8333 0.84 -0.8
960,270 - -0.1
960,446 + -0.5
960,569 - -2.2
960,577 + -1.1
960,597 - -1.7
960,611 - -0.3
960,616 + 0.1
960,706 + 0.1
960,753 + 0.0
960,755 + 1.6
960,757 + -0.1
960,767 - -0.7
960,767 + -0.7
960,768 + -1.2
960,774 + -0.6
960,774 + 0.4
960,775 + -1.2
960,777 - 1.3
960,780 + -2.0
960,784 - 0.0
960,784 - -0.9
960,785 + 0.1
960,785 + -1.6
960,787 - 0.8
960,795 - -0.2
960,796 + -2.3
960,797 - -0.2
960,801 + -0.3
960,802 + -1.3
960,805 + -0.8
960,805 + -0.8
960,810 + -0.1
960,811 - -1.0
960,813 - -1.2
960,822 + 0.4
960,825 + 0.0
960,834 - 0.7
960,836 + 0.9
960,847 + -0.3
960,852 - 0.1
960,861 - -1.3
960,868 - -0.1
960,870 - -0.3
960,872 - -0.1
960,873 - -1.1
960,887 + 0.6
960,919 - 0.2
960,922 + -1.5
960,925 - 0.7
960,927 - -0.5
960,930 + 0.2
960,933 + -0.5
960,935 - -0.0
960,938 - -2.9
960,939 + -2.1
960,948 + -1.1
960,949 + 0.1
960,952 - -1.6
960,952 - -1.7
960,953 + -0.2
960,955 + 0.4
960,955 - -0.2
960,957 + -0.8
960,989 + -0.9
960,999 + -3.5
961,027 + 1.0
961,042 - -2.1
961,064 - -1.1
961,211 + 0.7
961,257 - -0.2
961,333 - -0.2