Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8267

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8266: 16634 - K07297 ADIPOR adiponectin receptor, at 804995 to 806356 16634 mRNA_8267: 16635 - K01897 ACSL, fadD long-chain acyl-CoA synthetase, at 806792 to 809289 16635 mRNA_8268: 16636 - K11511 APITD1, CENPS, MHF1 centromere protein S, at 809649 to 810847 16636

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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805,938 + 16634 mRNA_8266 0.69 -1.6
806,226 - 0.0
806,271 + 0.2
806,382 - -0.0
806,390 - 0.4
806,508 - 0.4
806,526 + -0.6
806,526 - -1.7
806,528 - -0.2
806,530 - 0.6
806,530 - 0.5
806,539 - -0.3
806,550 - -1.2
806,554 - -0.6
806,557 + 0.1
806,560 + -1.4
806,589 - -0.1
806,639 - 0.9
806,640 + -0.3
806,648 - -0.1
806,691 - 0.2
806,718 + -1.8
806,730 + 0.4
806,969 - -0.0
806,970 + -0.4
806,999 - 1.1
807,168 - 16635 mRNA_8267 0.15 -0.5
807,422 - 16635 mRNA_8267 0.25 0.3
808,313 + 16635 mRNA_8267 0.61 -1.3
809,285 - 0.2
809,286 - 1.6
809,290 - 0.2
809,302 - -0.3
809,342 + -2.3
809,427 - -0.1
809,430 - 0.9
809,474 + -0.5
809,476 - 0.8
810,061 - 16636 mRNA_8268 0.34 1.7
810,200 - 16636 mRNA_8268 0.46 0.4
810,215 - 16636 mRNA_8268 0.47 -0.1