Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8262

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8261: 16629 - KOG0714 Molecular chaperone (DnaJ superfamily), at 791034 to 792171 16629 mRNA_8262: 16630 - K01958 PC, pyc pyruvate carboxylase, at 792361 to 796882 16630 mRNA_8263: 16631 - KOG1432 Predicted DNA repair exonuclease SIA1, at 797648 to 800551 16631

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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791,391 + 16629 mRNA_8261 0.31 0.4
791,441 + 16629 mRNA_8261 0.36 -0.1
791,699 - 16629 mRNA_8261 0.58 0.3
791,954 - 16629 mRNA_8261 0.81 -0.3
792,126 - 1.0
792,182 + -1.2
792,380 + -0.5
793,454 + 16630 mRNA_8262 0.24 0.5
793,551 - 16630 mRNA_8262 0.26 -0.0
793,638 + 16630 mRNA_8262 0.28 -0.2
794,292 + 16630 mRNA_8262 0.43 -1.2
794,585 + 16630 mRNA_8262 0.49 0.1
794,595 + 16630 mRNA_8262 0.49 -0.4
796,039 + 16630 mRNA_8262 0.81 -0.8
796,190 - 16630 mRNA_8262 0.85 -2.0
796,465 - 1.4
796,756 + -3.3
796,770 + 0.6
796,773 - 0.3
796,793 - -0.2
796,809 + -0.4
796,906 - -1.6
796,906 + 0.2
796,926 + -0.8
796,939 + -0.2
796,944 - -0.4
796,956 + -0.5
797,053 - -0.3
797,057 - 0.5
797,082 - -1.6
797,084 + -0.4
797,087 - -0.2
797,090 + -0.5
797,112 - 0.2
797,221 + -0.7
797,222 + -0.3
797,223 - -0.7
797,238 - 2.0
797,251 - -0.9
797,275 + 0.8
797,283 - 0.1
797,284 + -0.0
797,288 - -0.8
797,300 + -0.4
797,301 + -0.4
797,319 - 0.5
797,321 - -1.3
797,356 + -1.2
797,360 - -1.2
797,361 - -0.9
797,376 - -1.2
797,377 + -0.4
797,389 - 0.9
797,408 + 0.8
797,413 - 1.7
797,415 + 0.5
797,424 + 1.3
797,714 - -0.5
797,863 - -0.3
797,872 - -0.2