Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8254

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8253: 16621 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 774552 to 775844 16621 mRNA_8254: 16622 - HMMPfam-Stc1 domain-PF12898, at 776228 to 777333 16622 mRNA_8255: 16623 - K01792 E5.1.3.15 glucose-6-phosphate 1-epimerase, at 777687 to 778914 16623

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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775,340 + 16621 mRNA_8253 0.61 1.4
775,470 - 16621 mRNA_8253 0.71 1.4
775,474 + 16621 mRNA_8253 0.71 -0.1
775,606 + 16621 mRNA_8253 0.82 1.0
775,906 - -0.7
775,923 + -0.2
775,938 + 0.2
776,030 + -0.3
776,087 - -0.2
776,092 + -1.6
776,226 + -0.0
776,625 - 16622 mRNA_8254 0.36 0.0
776,801 + 16622 mRNA_8254 0.52 0.5
777,072 + 16622 mRNA_8254 0.76 -0.5
777,189 + 16622 mRNA_8254 0.87 0.1
777,630 + 0.2