Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8174

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8174: 16542 - K00645 fabD [acyl-carrier-protein] S-malonyltransferase, at 598873 to 600672 16542 mRNA_8175: 16543 - K15303 AKR7 aflatoxin B1 aldehyde reductase, at 600954 to 602417 16543

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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597,900 + -1.8
597,941 + 0.4
598,203 - -0.2
598,226 - -0.3
598,345 + 0.1
598,345 + -1.7
598,345 + -0.5
598,440 + -0.4
598,452 + 0.3
598,465 - -2.1
598,471 - -0.4
598,471 - -0.8
598,481 + -0.7
598,483 + 0.4
598,493 + 0.0
598,494 - 0.3
598,498 + 0.5
598,499 + 0.1
598,501 + 0.3
598,510 - -0.0
598,514 + -0.9
598,520 + -0.2
598,520 + 0.0
598,520 + 0.2
598,809 - 0.0
598,809 - -1.0
598,815 + -0.1
598,820 - -0.2
598,974 + 0.4
599,002 - -0.1
599,396 + 16542 mRNA_8174 0.29 0.6
599,853 - 16542 mRNA_8174 0.54 -0.7
600,261 + 16542 mRNA_8174 0.77 -0.8
600,851 - 2.1
600,980 + -1.1