Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8146

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8145: 16513 - K15304 RANBP3 Ran-binding protein 3, at 518265 to 522947 16513 mRNA_8146: 16514 - HMMPfam-PH domain-PF00169,ProSiteProfiles-PH domain profile.-PS50003,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF50729,SUPERFAMILY--SSF55753, at 523156 to 525295 16514 mRNA_8147: 16515 - HMMPfam-Enoyl-CoA hydratase/isomerase family-PF00378,SUPERFAMILY--SSF52096, at 525577 to 526736 16515

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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522,298 + 16513 mRNA_8145 0.86 -0.9
522,423 + 16513 mRNA_8145 0.89 -0.6
522,714 + 1.2
522,733 - 0.2
522,972 - 0.1
522,992 + -0.4
523,005 + -0.7
523,075 - -0.0
523,160 - 0.4
523,171 - -0.2
523,307 + 0.5
524,590 - 16514 mRNA_8146 0.67 -0.5
524,595 + 16514 mRNA_8146 0.67 -0.6
524,890 + 16514 mRNA_8146 0.81 -0.5
524,935 - 16514 mRNA_8146 0.83 -1.5
525,163 + 0.4
525,179 - -0.8
525,310 - -0.5
525,335 + -0.3
525,338 - -0.3
525,353 - 0.1
525,354 - -0.0
525,474 - -1.0
525,615 - -1.5
525,657 + 0.2
525,766 + 16515 mRNA_8147 0.16 0.4
525,794 + 16515 mRNA_8147 0.19 -0.8
526,113 + 16515 mRNA_8147 0.46 -0.2
526,194 - 16515 mRNA_8147 0.53 -0.0