Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8095

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8094: 16462 - K10775 PAL phenylalanine ammonia-lyase, at 403260 to 405803 16462 mRNA_8095: 16463 - K17508 PTC7, PPTC7 protein phosphatase PTC7, at 406311 to 408343 16463 mRNA_8096: 16464 - K13338 PEX1 peroxin-1, at 408811 to 412943 16464

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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405,815 - 1.3
405,871 + 1.2
405,875 + 1.8
405,875 + -0.5
405,909 - -0.8
405,913 + -1.0
405,936 + -0.0
405,942 + -0.6
405,950 + 0.4
406,015 - -0.6
406,242 + -0.3
406,532 + 16463 mRNA_8095 0.11 0.6
406,947 - 16463 mRNA_8095 0.31 0.5
406,974 + 16463 mRNA_8095 0.33 -0.5
407,068 + 16463 mRNA_8095 0.37 -0.8
407,255 + 16463 mRNA_8095 0.46 0.2
407,688 - 16463 mRNA_8095 0.68 0.6
407,816 - 16463 mRNA_8095 0.74 -1.9
407,836 - 16463 mRNA_8095 0.75 1.2
407,839 - 16463 mRNA_8095 0.75 0.7
407,893 - 16463 mRNA_8095 0.78 -1.8
407,954 - 16463 mRNA_8095 0.81 -0.7
408,012 + 16463 mRNA_8095 0.84 0.6
408,126 + 16463 mRNA_8095 0.89 -0.2
408,243 - -0.4
408,249 - -0.0
408,274 - -0.3
408,308 + 0.4
408,421 + -1.5
408,424 - -0.1
408,434 + 0.9
408,434 + -0.2
408,473 + -0.2
408,562 - -0.5
408,567 + -1.1
408,581 - 1.3
408,584 + -0.9
408,587 + -0.5
408,588 + -0.4
408,602 + -1.7
408,851 - -0.9
408,888 + -2.0