Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8018

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8017: 16385 - K11087 SNRPD1, SMD1 small nuclear ribonucleoprotein D1, at 218888 to 219506 16385 mRNA_8018: 16386 - Hypothetical Protein, at 220418 to 221008 16386

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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220,018 - -0.4
220,029 - -0.4
220,032 - -0.2
220,035 - -1.0
220,043 + -0.2
220,045 + 0.0
220,060 + 0.1
220,638 + 16386 mRNA_8018 0.37 0.2
220,725 - 16386 mRNA_8018 0.52 1.5
220,870 + 16386 mRNA_8018 0.76 0.1
220,912 - 16386 mRNA_8018 0.84 -1.7
221,023 + 0.9
221,023 + -0.2
221,165 + -0.4
221,321 + -0.0
221,330 - 0.7
221,587 - -1.3
221,717 - 0.4
221,785 - -0.3