Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7978

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7977: 16345 - K17757 CARKD ATP-dependent NAD(P)H-hydrate dehydratase, at 134234 to 135920 16345 mRNA_7978: 16346 - K13341 PEX7, PTS2R peroxin-7, at 136245 to 137738 16346 mRNA_7979: 16347 - KOG0504 FOG Ankyrin repeat, at 137884 to 138763 16347

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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135,439 + 16345 mRNA_7977 0.71 -1.0
135,469 + 16345 mRNA_7977 0.73 -1.8
136,191 + -1.0
136,197 + 0.1
136,354 + -2.9
136,527 - 16346 mRNA_7978 0.19 -3.0
136,792 + 16346 mRNA_7978 0.37 -2.0
137,045 - 16346 mRNA_7978 0.54 -3.8
137,253 + 16346 mRNA_7978 0.67 -2.6
137,370 - 16346 mRNA_7978 0.75 -2.7
137,523 + 16346 mRNA_7978 0.86 -1.9
137,529 + 16346 mRNA_7978 0.86 -2.5
137,817 - 0.9
138,045 + 16347 mRNA_7979 0.18 -2.8