Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7740

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7739: 16107 - K20476 RIC1 RAB6A-GEF complex partner protein 1, at 962010 to 966625 16107 mRNA_7740: 16108 - HMMPfam-Kinetochore complex Sim4 subunit Fta1-PF13092, at 966858 to 968054 16108 mRNA_7741: 16109 - Hypothetical Protein, at 968367 to 969216 16109

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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965,935 - 16107 mRNA_7739 0.85 0.0
966,019 + 16107 mRNA_7739 0.87 -0.1
966,040 - 16107 mRNA_7739 0.87 -0.3
966,048 + 16107 mRNA_7739 0.87 -1.1
966,106 - 16107 mRNA_7739 0.89 0.0
966,150 - 16107 mRNA_7739 0.90 -0.1
966,156 + 16107 mRNA_7739 0.90 -0.5
966,204 - -1.4
966,204 - 0.1
966,220 + -0.0
966,242 - -0.5
966,246 + 0.5
966,350 + -0.6
966,400 - -0.7
966,510 + -0.4
966,759 + 0.8
966,763 + -0.9
966,768 + -0.7
966,935 - -1.2
966,949 - -0.7
966,997 + 16108 mRNA_7740 0.12 -1.3
966,997 + 16108 mRNA_7740 0.12 -0.5
966,997 + 16108 mRNA_7740 0.12 0.6
966,997 + 16108 mRNA_7740 0.12 1.7
967,114 - 16108 mRNA_7740 0.21 -0.3
967,193 - 16108 mRNA_7740 0.28 -0.7
967,215 + 16108 mRNA_7740 0.30 1.1
967,288 + 16108 mRNA_7740 0.36 -0.5
967,639 - 16108 mRNA_7740 0.65 -0.5
967,850 + 16108 mRNA_7740 0.83 -0.7
967,850 + 16108 mRNA_7740 0.83 0.6
968,111 - -0.3
968,113 - 0.2
968,308 + 0.0
968,312 - -0.3
968,314 - 0.2
968,769 - 16109 mRNA_7741 0.47 1.5
968,904 + 16109 mRNA_7741 0.63 0.0
968,923 + 16109 mRNA_7741 0.65 -0.4