Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7689

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7688: 16056 - Hypothetical Protein, at 840776 to 844586 16056 mRNA_7689: 16057 - BLAST triacylglycerol lipase [Pochonia chlamydosporia 170], at 844796 to 845727 16057 mRNA_7690: 16058 - BLAST proteophosphoglycan ppg4 [Moesziomyces aphidis DSM 70..., at 846247 to 848747 16058

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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843,801 - 16056 mRNA_7688 0.79 1.3
843,878 + 16056 mRNA_7688 0.81 0.7
843,993 + 16056 mRNA_7688 0.84 0.2
844,075 - 16056 mRNA_7688 0.87 -1.2
844,197 - 16056 mRNA_7688 0.90 -0.9
844,237 - 1.5
844,516 + 0.4
844,521 - 0.7
844,585 + -1.2
844,592 - -0.9
844,713 - -1.8
845,021 + 16057 mRNA_7689 0.24 -1.6
845,154 + 16057 mRNA_7689 0.38 0.3
845,157 - 16057 mRNA_7689 0.39 0.1
845,281 + 16057 mRNA_7689 0.52 1.2
845,370 - 16057 mRNA_7689 0.62 0.2
845,373 - 16057 mRNA_7689 0.62 -1.2
845,510 - 16057 mRNA_7689 0.77 0.1
845,586 + 16057 mRNA_7689 0.85 -0.4
845,696 + 0.5
845,704 + -0.5
845,713 - 0.3
845,728 + 0.1
845,826 + -0.8
845,864 + -0.2
845,871 - -0.3
845,878 + -1.6
845,966 - 0.1
845,997 + -0.7
845,998 - -0.4
846,005 - -0.5
846,020 + -0.2
846,038 - 0.5
846,299 + -0.4
846,386 - 0.4
846,498 - 16058 mRNA_7690 0.10 0.3
846,666 - 16058 mRNA_7690 0.17 -1.4
846,677 + 16058 mRNA_7690 0.17 -0.0