Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7546

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7544: 15912 - K07552 bcr MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein, at 529753 to 531940 15912 mRNA_7545: 15913 - Hypothetical Protein, at 532000 to 532304 15913 mRNA_7546: 15914 - K04523 UBQLN, DSK2 ubiquilin, at 532517 to 534299 15914 mRNA_7547: 15915 - Hypothetical Protein, at 534942 to 536762 15915

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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531,760 - 0.8
532,374 + 0.0
532,401 + -0.7
532,641 - -0.7
532,822 - 15914 mRNA_7546 0.17 -2.6
533,280 - 15914 mRNA_7546 0.43 0.1
533,529 - 15914 mRNA_7546 0.57 0.6
533,659 - 15914 mRNA_7546 0.64 0.2
533,798 + 15914 mRNA_7546 0.72 -0.4
533,807 - 15914 mRNA_7546 0.72 0.6
533,819 - 15914 mRNA_7546 0.73 -0.5
533,819 + 15914 mRNA_7546 0.73 -0.6
533,942 - 15914 mRNA_7546 0.80 0.3
533,948 - 15914 mRNA_7546 0.80 -0.7
533,952 + 15914 mRNA_7546 0.80 -3.0
533,952 + 15914 mRNA_7546 0.80 -0.4
533,961 - 15914 mRNA_7546 0.81 0.0
533,961 - 15914 mRNA_7546 0.81 0.5
534,091 - 15914 mRNA_7546 0.88 -0.3
534,112 + 15914 mRNA_7546 0.89 0.1
534,254 - 0.4
534,259 + -0.8
534,259 - -0.2
534,262 + -0.5
534,265 + 0.4
534,265 + 0.3
534,284 + -0.0
534,419 - -0.6
534,550 - 0.1
534,563 - -0.5
534,573 + 0.4