Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7508

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7507: 15875 - K17987 NBR1 next to BRCA1 gene 1 protein, at 454869 to 457717 15875 mRNA_7508: 15876 - SUPERFAMILY--SSF52047, at 457973 to 459421 15876 mRNA_7509: 15877 - K11548 NUF2, CDCA1 kinetochore protein Nuf2, at 459661 to 461495 15877

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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457,174 - 15875 mRNA_7507 0.81 -0.9
457,313 - 15875 mRNA_7507 0.86 -0.9
457,587 + 1.0
458,645 + 15876 mRNA_7508 0.46 -2.1
458,785 - 15876 mRNA_7508 0.56 -2.2
458,810 - 15876 mRNA_7508 0.58 2.0
458,810 + 15876 mRNA_7508 0.58 0.3
459,093 + 15876 mRNA_7508 0.77 1.0
459,420 + -1.5