Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7293

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7292: 15660 - SUPERFAMILY--SSF56112, at 1318921 to 1320950 15660 mRNA_7293: 15661 - Hypothetical Protein, at 1321183 to 1322494 15661 mRNA_7294: 15662 - HMMPfam-F-box-like-PF12937, at 1323105 to 1324702 15662

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,320,241 - 15660 mRNA_7292 0.65 -0.3
1,320,328 + 15660 mRNA_7292 0.69 -0.7
1,320,416 + 15660 mRNA_7292 0.74 1.5
1,320,438 - 15660 mRNA_7292 0.75 0.7
1,320,603 - 15660 mRNA_7292 0.83 0.1
1,320,768 + -0.4
1,320,862 - 0.2
1,320,962 + 0.3
1,321,232 - 0.8
1,321,244 + -0.0
1,321,255 + -1.7
1,321,304 + -1.2
1,321,484 + 15661 mRNA_7293 0.23 -0.9
1,321,487 - 15661 mRNA_7293 0.23 -0.0
1,321,528 - 15661 mRNA_7293 0.26 -1.0
1,321,531 + 15661 mRNA_7293 0.27 0.8
1,321,544 - 15661 mRNA_7293 0.28 0.0
1,321,565 + 15661 mRNA_7293 0.29 0.5
1,321,652 - 15661 mRNA_7293 0.36 0.2
1,321,783 - 15661 mRNA_7293 0.46 2.1
1,321,823 - 15661 mRNA_7293 0.49 0.6
1,321,830 - 15661 mRNA_7293 0.49 0.4
1,322,007 + 15661 mRNA_7293 0.63 -0.1
1,322,455 + -0.2
1,322,474 - -0.6
1,322,552 - 0.3
1,322,562 + -0.1
1,322,575 + -0.2
1,322,709 - -1.3
1,322,710 + -0.8
1,322,735 + -0.2
1,322,853 + -0.3
1,322,878 + -0.2
1,322,918 + -0.9
1,323,044 + -0.4
1,323,110 + -1.4
1,323,153 - -0.0
1,323,158 - 0.3
1,323,161 + -1.0
1,323,244 - -0.5
1,323,340 - 15662 mRNA_7294 0.15 0.1