Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7253

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7252: 15620 - Hypothetical Protein, at 1222281 to 1223804 15620 mRNA_7253: 15621 - KOG2497 Predicted methyltransferase, at 1224548 to 1225738 15621 mRNA_7254: 15622 - Hypothetical Protein, at 1226042 to 1227561 15622

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,223,620 - 15620 mRNA_7252 0.88 -0.0
1,223,880 + -1.1
1,223,904 - 1.1
1,223,907 + -0.2
1,224,166 - 0.7
1,224,173 - -0.2
1,224,182 + 0.4
1,224,182 + 0.6
1,224,321 + 0.7
1,224,327 + 1.1
1,224,411 + -1.1
1,224,588 + 1.4
1,224,600 + 0.6
1,224,735 + 15621 mRNA_7253 0.16 0.8
1,225,029 + 15621 mRNA_7253 0.40 -0.6
1,225,069 + 15621 mRNA_7253 0.44 -1.6
1,225,374 + 15621 mRNA_7253 0.69 1.9
1,225,379 - 15621 mRNA_7253 0.70 0.4
1,225,383 + 15621 mRNA_7253 0.70 -0.8
1,225,677 + -0.1
1,225,760 + -0.8
1,225,834 + -0.4
1,225,841 + -0.3
1,225,883 + -1.5
1,225,913 - -0.2
1,225,932 - -0.5
1,226,078 + -0.5
1,226,111 - -0.4
1,226,112 - -0.1
1,226,250 + 15622 mRNA_7254 0.14 0.1
1,226,350 + 15622 mRNA_7254 0.20 -0.6
1,226,382 - 15622 mRNA_7254 0.22 0.5
1,226,388 + 15622 mRNA_7254 0.23 -1.6
1,226,388 + 15622 mRNA_7254 0.23 -1.2
1,226,396 + 15622 mRNA_7254 0.23 -0.0
1,226,491 - 15622 mRNA_7254 0.30 0.3
1,226,634 - 15622 mRNA_7254 0.39 -0.6
1,226,711 + 15622 mRNA_7254 0.44 0.7
1,226,737 + 15622 mRNA_7254 0.46 1.4