Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7235

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7234: 15602 - HMMPfam-Mitochondrial ribosomal protein subunit-PF11709, at 1188848 to 1190629 15602 mRNA_7235: 15603 - Hypothetical Protein, at 1191268 to 1192067 15603 mRNA_7236: 15604 - Hypothetical Protein, at 1192664 to 1193230 15604

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,190,636 - -0.0
1,190,751 + 0.8
1,190,787 + 0.3
1,190,907 - 0.3
1,190,909 + 0.6
1,190,920 - -1.3
1,190,997 - 0.4
1,191,001 - 0.5
1,191,022 + -3.5
1,191,040 - 0.4
1,191,042 + 0.1
1,191,062 - 0.5
1,191,067 - 1.3
1,191,068 - 0.0
1,191,088 + -0.5
1,191,089 - -0.7
1,191,137 + 0.4
1,191,207 - 0.8
1,191,226 - -0.9
1,191,229 + 1.5
1,191,248 + -0.2
1,191,253 - 0.5
1,191,257 + 0.3
1,191,281 - 1.2
1,191,361 + 15603 mRNA_7235 0.12 1.3
1,191,393 + 15603 mRNA_7235 0.16 1.6
1,191,414 - 15603 mRNA_7235 0.18 0.4
1,191,531 - 15603 mRNA_7235 0.33 0.3
1,191,545 + 15603 mRNA_7235 0.35 0.1
1,191,659 + 15603 mRNA_7235 0.49 0.0
1,191,669 + 15603 mRNA_7235 0.50 0.2
1,191,669 + 15603 mRNA_7235 0.50 1.7
1,191,683 + 15603 mRNA_7235 0.52 0.3
1,191,728 + 15603 mRNA_7235 0.57 1.0
1,191,732 - 15603 mRNA_7235 0.58 1.4
1,191,762 - 15603 mRNA_7235 0.62 0.6
1,191,777 - 15603 mRNA_7235 0.64 0.8
1,191,787 + 15603 mRNA_7235 0.65 1.0
1,191,924 - 15603 mRNA_7235 0.82 0.6
1,192,054 - 0.3
1,192,159 - -0.9
1,192,330 - -0.0
1,192,418 + -0.0
1,192,555 - 0.5
1,192,562 + 0.8
1,192,831 + 15604 mRNA_7236 0.29 1.2
1,192,862 - 15604 mRNA_7236 0.35 1.0