Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7183

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7183: 15551 - Hypothetical Protein, at 1068155 to 1071791 15551 mRNA_7184: 15552 - K02219 CKS1 cyclin-dependent kinase regulatory subunit CKS1, at 1072312 to 1073593 15552

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,067,861 + -0.7
1,067,983 + -0.5
1,068,028 + -1.3
1,068,767 + 15551 mRNA_7183 0.17 -1.6
1,068,801 + 15551 mRNA_7183 0.18 -0.4
1,068,810 - 15551 mRNA_7183 0.18 -1.0
1,068,872 + 15551 mRNA_7183 0.20 0.7
1,068,916 - 15551 mRNA_7183 0.21 -0.7
1,069,605 + 15551 mRNA_7183 0.40 -0.6
1,069,752 - 15551 mRNA_7183 0.44 0.1
1,069,759 + 15551 mRNA_7183 0.44 -0.1
1,069,805 + 15551 mRNA_7183 0.45 0.6
1,070,075 - 15551 mRNA_7183 0.53 -0.6
1,070,254 + 15551 mRNA_7183 0.58 0.3
1,070,797 + 15551 mRNA_7183 0.73 1.3
1,071,061 - 15551 mRNA_7183 0.80 -0.8
1,071,065 + 15551 mRNA_7183 0.80 0.6
1,071,074 - 15551 mRNA_7183 0.80 -2.0
1,071,081 + 15551 mRNA_7183 0.80 -1.0
1,071,481 + 0.2
1,071,485 - -0.9
1,071,487 - -1.1
1,071,669 - -0.6
1,071,673 + -1.3
1,071,823 + -1.3
1,071,828 + 0.4
1,072,094 + -0.2
1,072,112 - 0.1
1,072,119 + -0.4
1,072,252 - -0.3
1,072,255 + -2.2
1,072,262 + 0.9
1,072,446 - 15552 mRNA_7184 0.10 -0.1
1,072,546 - 15552 mRNA_7184 0.18 1.4
1,072,582 - 15552 mRNA_7184 0.21 -2.0
1,072,684 + 15552 mRNA_7184 0.29 -0.9