Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7098

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7097: 15465 - K03064 PSMC6, RPT4 26S proteasome regulatory subunit T4, at 875663 to 877708 15465 mRNA_7098: 15466 - KOG2633 Hismacro and SEC14 domain-containing proteins, at 877934 to 879350 15466 mRNA_7099: 15467 - K12845 SNU13, NHP2L U4/U6 small nuclear ribonucleoprotein SNU13, at 879733 to 880505 15467

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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877,772 + -0.1
877,798 + 0.7
877,803 + 0.1
878,086 + 15466 mRNA_7098 0.11 -0.7
878,232 - 15466 mRNA_7098 0.21 -0.1
878,357 - 15466 mRNA_7098 0.30 -0.2
878,380 - 15466 mRNA_7098 0.31 -2.5
878,409 + 15466 mRNA_7098 0.34 -0.3
878,524 - 15466 mRNA_7098 0.42 1.0
878,643 - 15466 mRNA_7098 0.50 0.2
878,806 - 15466 mRNA_7098 0.62 2.0
878,925 - 15466 mRNA_7098 0.70 -0.8
878,929 + 15466 mRNA_7098 0.70 -0.5
878,948 - 15466 mRNA_7098 0.72 0.7
879,240 + 0.4
879,410 + 0.3
879,524 + 0.2
879,526 + -2.3
879,535 - -1.0
879,548 - -0.4