Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7091

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7090: 15458 - Hypothetical Protein, at 857959 to 859367 15458 mRNA_7091: 15459 - ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157, at 859673 to 862971 15459 mRNA_7092: 15460 - KOG2545 Conserved membrane protein, at 863308 to 866540 15460

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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858,866 - 15458 mRNA_7090 0.64 -0.2
859,728 - -1.8
859,861 + -0.2
859,871 - 0.2
859,889 + -0.2
859,889 - 0.0
859,897 + 0.6
859,897 + 0.2
860,041 + 15459 mRNA_7091 0.11 -0.7
860,062 - 15459 mRNA_7091 0.12 -0.8
860,062 + 15459 mRNA_7091 0.12 -1.6
860,070 + 15459 mRNA_7091 0.12 -1.0
860,073 - 15459 mRNA_7091 0.12 0.1
860,077 + 15459 mRNA_7091 0.12 0.2
860,077 + 15459 mRNA_7091 0.12 1.1
860,191 - 15459 mRNA_7091 0.16 -0.6
860,206 + 15459 mRNA_7091 0.16 -0.2
860,216 - 15459 mRNA_7091 0.16 0.8
860,224 + 15459 mRNA_7091 0.17 0.2
860,370 + 15459 mRNA_7091 0.21 0.5
860,393 + 15459 mRNA_7091 0.22 -1.6
860,403 + 15459 mRNA_7091 0.22 0.4
860,521 + 15459 mRNA_7091 0.26 -1.0
860,543 + 15459 mRNA_7091 0.26 0.5
860,839 - 15459 mRNA_7091 0.35 -0.3
861,207 + 15459 mRNA_7091 0.46 -0.9
861,261 + 15459 mRNA_7091 0.48 0.6
861,351 + 15459 mRNA_7091 0.51 -0.6
861,587 - 15459 mRNA_7091 0.58 -0.8
861,588 + 15459 mRNA_7091 0.58 -0.1
861,603 + 15459 mRNA_7091 0.59 0.2
861,712 + 15459 mRNA_7091 0.62 -0.2
861,903 + 15459 mRNA_7091 0.68 -0.7
861,947 + 15459 mRNA_7091 0.69 -0.9
861,960 - 15459 mRNA_7091 0.69 -1.4
862,154 + 15459 mRNA_7091 0.75 -0.5
862,209 + 15459 mRNA_7091 0.77 0.4
862,356 - 15459 mRNA_7091 0.81 0.4
862,787 + 0.6
862,813 - 0.2
862,831 - -1.0
862,848 - -1.0
862,975 + 0.0
863,009 + 0.2
863,175 - 1.5