Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7083

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7082: 15450 - K20406 NPRL3 nitrogen permease regulator 3-like protein, at 838009 to 840569 15450 mRNA_7083: 15451 - K18803 HPM1 protein-histidine N-methyltransferase, at 840577 to 841991 15451 mRNA_7084: 15452 - KOG1575 Voltage-gated shaker-like K+ channel, subunit beta/KCNAB, at 842141 to 843806 15452

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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840,067 - 15450 mRNA_7082 0.80 -1.4
840,193 - 15450 mRNA_7082 0.85 -0.8
841,411 + 15451 mRNA_7083 0.59 1.9
841,713 - 15451 mRNA_7083 0.80 -0.8
841,733 + 15451 mRNA_7083 0.82 1.0
842,012 - -1.2
842,022 - -0.2
842,027 + -0.4
842,029 + 0.2
842,180 - 0.3
842,189 + -0.1
842,280 - 0.2
842,406 - 15452 mRNA_7084 0.16 -0.6
842,440 - 15452 mRNA_7084 0.18 -1.2
842,764 + 15452 mRNA_7084 0.37 0.1