Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7020

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7019: 15387 - K13212 LUC7L2 RNA-binding protein Luc7-like 2, at 686088 to 688034 15387 mRNA_7020: 15388 - K11446 KDM5, JARID1 histone demethylase JARID1, at 688229 to 691595 15388

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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687,471 - 15387 mRNA_7019 0.71 -0.2
687,486 - 15387 mRNA_7019 0.72 1.3
688,080 + -2.1
688,203 - -0.9
688,220 + -1.1
688,493 - -0.6
688,667 + 15388 mRNA_7020 0.13 0.1
688,806 - 15388 mRNA_7020 0.17 0.2
689,199 + 15388 mRNA_7020 0.29 0.4
689,848 + 15388 mRNA_7020 0.48 -0.5
689,959 - 15388 mRNA_7020 0.51 -0.4
690,013 + 15388 mRNA_7020 0.53 0.1
690,159 + 15388 mRNA_7020 0.57 1.0
690,861 - 15388 mRNA_7020 0.78 0.8
691,170 + 15388 mRNA_7020 0.87 1.3
691,170 - 15388 mRNA_7020 0.87 -1.2
691,299 - -0.3
691,451 - 0.7
691,456 + -0.5
691,478 + -0.6
691,479 + 0.3
691,495 + 0.6
691,602 + 0.4
691,630 + 1.1
691,630 + 0.8
691,633 - -0.8
691,633 - -0.6
691,763 - -1.2
691,767 - 0.4
691,780 - -0.7
691,780 + 0.3
691,792 + -0.7
691,794 + -0.7
691,796 - -0.3
691,796 - 0.9
691,939 + -0.7
691,940 - -0.8
692,072 - -0.2
692,081 + -1.1
692,084 - -0.4
692,232 - -0.4
692,248 + -0.7
692,393 - -1.7
692,395 + -0.0
692,395 + 0.3
692,527 + -0.0
692,528 + 0.5
692,553 - 0.6