Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7015

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7015: 15383 - KOG2913 Predicted membrane protein, at 678211 to 680397 15383 mRNA_7016: 15384 - K01142 E3.1.11.2, xthA exodeoxyribonuclease III, at 680551 to 683526 15384

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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677,376 + -0.4
677,668 - -0.2
677,939 - -0.8
678,090 + -0.2
678,091 + -2.8
678,262 + 0.1
678,277 - -0.4
678,384 - -2.2
678,403 + 0.9
678,405 - -1.2
678,529 - 15383 mRNA_7015 0.15 -0.7
678,691 - 15383 mRNA_7015 0.22 1.1
678,985 - 15383 mRNA_7015 0.35 1.2
679,036 + 15383 mRNA_7015 0.38 -0.4
679,572 - 15383 mRNA_7015 0.62 -0.0
679,869 - 15383 mRNA_7015 0.76 -0.3
680,157 - 15383 mRNA_7015 0.89 -0.1
680,585 + 0.3
680,694 - 0.1
680,711 + 0.0
680,745 + -0.1
680,749 + 0.1
681,158 - 15384 mRNA_7016 0.20 -0.1
681,343 - 15384 mRNA_7016 0.27 -0.9