Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6943

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6942: 15310 - K15029 EIF3L translation initiation factor 3 subunit L, at 491144 to 493608 15310 mRNA_6943: 15311 - SUPERFAMILY--SSF52047, at 493796 to 495109 15311 mRNA_6944: 15312 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047, at 495585 to 496942 15312

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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493,289 - 15310 mRNA_6942 0.87 1.6
493,292 + 15310 mRNA_6942 0.87 -1.8
493,434 - -0.2
493,440 + 0.1
493,506 + 0.5
493,854 - -0.1
493,894 + 0.1
494,151 - 15311 mRNA_6943 0.27 -0.3
494,172 + 15311 mRNA_6943 0.29 0.5
494,444 + 15311 mRNA_6943 0.49 0.2
495,065 - -1.6
495,084 + -1.0
495,198 - -0.3
495,205 + 0.0
495,215 + -1.1
495,623 - 1.9
495,629 - -0.3
495,635 + -0.2
495,636 - -0.3