Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6934

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6933: 15301 - KOG0810 SNARE protein Syntaxin 1 and related proteins, at 467075 to 468286 15301 mRNA_6934: 15302 - K12871 CCDC12 coiled-coil domain-containing protein 12, at 468467 to 469312 15302 mRNA_6935: 15303 - K12830 SF3B3, SAP130, RSE1 splicing factor 3B subunit 3, at 469424 to 473834 15303

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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467,518 + 15301 mRNA_6933 0.37 -1.4
467,620 - 15301 mRNA_6933 0.45 -0.7
467,630 + 15301 mRNA_6933 0.46 -1.0
467,743 - 15301 mRNA_6933 0.55 0.3
468,025 - 15301 mRNA_6933 0.78 -0.7
468,352 - -0.9
468,454 - -0.4
468,591 - 15302 mRNA_6934 0.15 -0.9
469,209 + 15302 mRNA_6934 0.88 -1.1
469,307 - 0.3
469,334 - -0.0
469,349 + -1.4
469,366 - -1.2