Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6833

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6832: 15200 - K18158 NCA2 nuclear control of ATPase protein 2, at 229712 to 231545 15200 mRNA_6833: 15201 - HMMPfam-Outer mitochondrial membrane transport complex protein-PF10568,HMMPfam-Tom37 C-terminal domain-PF11801, at 231692 to 232700 15201 mRNA_6834: 15202 - KOG3030 Lipid phosphate phosphatase and related enzymes of the PAP2 family, at 233665 to 235762 15202

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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230,895 - 15200 mRNA_6832 0.65 0.4
231,024 - 15200 mRNA_6832 0.72 -0.5
231,058 - 15200 mRNA_6832 0.73 -0.2
231,192 - 15200 mRNA_6832 0.81 1.2
231,238 + 15200 mRNA_6832 0.83 -0.5
231,350 + 15200 mRNA_6832 0.89 0.1
231,471 + 1.3
231,471 - 0.0
231,499 - -0.3
231,515 + 0.3
231,622 - -0.3
231,632 + 0.1
231,659 + -1.3
231,674 + -0.2
231,775 - -0.8
231,783 - -0.8
231,792 + 0.5
231,795 + 15201 mRNA_6833 0.10 1.8
231,815 - 15201 mRNA_6833 0.12 0.5
231,815 + 15201 mRNA_6833 0.12 -1.1
231,930 - 15201 mRNA_6833 0.24 -0.0
231,931 - 15201 mRNA_6833 0.24 -1.9
231,937 - 15201 mRNA_6833 0.24 -1.1
231,955 + 15201 mRNA_6833 0.26 -0.4
231,962 - 15201 mRNA_6833 0.27 -0.2
232,047 + 15201 mRNA_6833 0.35 -1.5
232,513 + 15201 mRNA_6833 0.81 -0.9
232,680 - -0.2
232,831 - 0.6
232,964 - 0.2
233,152 - -0.2
233,304 + 0.1
233,411 + -1.4
233,442 - 1.2
233,464 + 0.6
233,485 - 0.1
233,513 + 0.2
233,534 - -1.3