Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6791

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6790: 15158 - K00671 E2.3.1.97, NMT glycylpeptide N-tetradecanoyltransferase, at 133483 to 136016 15158 mRNA_6791: 15159 - K00888 PI4KA phosphatidylinositol 4-kinase A, at 136109 to 143352 15159 mRNA_6792: 15160 - K14396 PABPN1, PABP2 polyadenylate-binding protein 2, at 143720 to 144685 15160

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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136,054 - 0.4
136,066 - 0.3
136,069 - -0.8
136,071 + 0.4
136,079 + -0.3
136,093 + -0.6
136,093 + 1.3
137,994 - 15159 mRNA_6791 0.26 1.3
138,144 + 15159 mRNA_6791 0.28 0.1
139,098 - 15159 mRNA_6791 0.41 0.3
143,407 + 0.7
143,850 - 15160 mRNA_6792 0.13 0.8
143,906 + 15160 mRNA_6792 0.19 0.3
144,023 + 15160 mRNA_6792 0.31 0.2
144,186 + 15160 mRNA_6792 0.48 1.1