Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6786

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6785: 15153 - K03860 PIGQ, GPI1 phosphatidylinositol glycan, class Q, at 123273 to 125638 15153 mRNA_6786: 15154 - K14784 CMS1 protein CMS1, at 125988 to 127224 15154 mRNA_6787: 15155 - HMMPfam-Mitochondrial ribosomal protein L31-PF09784, at 127368 to 127805 15155 mRNA_6788: 15156 - K05853 ATP2A Ca2+ transporting ATPase, sarcoplasmic/endoplasmic reticulum, at 127975 to 131651 15156

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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125,152 - 15153 mRNA_6785 0.79 0.5
125,159 + 15153 mRNA_6785 0.80 -1.7
125,339 + 15153 mRNA_6785 0.87 -0.5
125,447 + 1.4
125,736 + -0.6
125,764 - 0.1
125,790 - 3.5
125,793 - 0.9
125,918 - 2.1
125,920 - -0.4
125,933 - 0.3
125,956 + -0.4
126,080 - -0.3
126,083 - -1.1
126,084 + -0.4
126,108 + 0.4
126,111 + 0.3
126,527 - 15154 mRNA_6786 0.44 -1.2
127,838 - -0.4
127,841 + -0.1
127,863 + 0.3
127,863 - 0.2
127,864 + 0.7
127,866 - -0.7
127,867 - -1.9
128,011 - 1.2
128,013 + -0.8
128,029 + 0.8
128,058 + 0.5