Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6711

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6710: 15078 - SUPERFAMILY--SSF50685, at 1510573 to 1512987 15078 mRNA_6711: 15079 - Hypothetical Protein, at 1513538 to 1514008 15079

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,512,993 - 0.2
1,513,266 + -0.8
1,513,285 - -0.6
1,513,396 + -0.7
1,513,451 - -0.5
1,513,454 + 0.8
1,513,455 + 0.4
1,513,557 + -1.4
1,513,567 - 0.1
1,513,723 + 15079 mRNA_6711 0.39 0.8
1,513,745 - 15079 mRNA_6711 0.44 0.3
1,513,768 + 15079 mRNA_6711 0.49 -1.5
1,513,895 - 15079 mRNA_6711 0.76 -0.5
1,514,317 + -1.4
1,514,319 + -1.4
1,514,348 + -0.1
1,514,348 + -0.6
1,514,363 - -0.6
1,514,364 + -1.4
1,514,365 + -0.7
1,514,368 - 0.3
1,514,460 + -0.7
1,514,463 - 0.2
1,514,471 - -0.3
1,514,473 - 0.5
1,514,475 + -0.4
1,514,477 + -0.4
1,514,486 - -0.3
1,514,488 + -0.3
1,514,490 - 0.8
1,514,490 - 0.7
1,514,499 + -0.4
1,514,501 + 0.4
1,514,506 + -1.2
1,514,583 + 0.1
1,514,592 - -0.2
1,514,616 - 0.2
1,514,617 + 0.2
1,514,638 - 1.4
1,514,642 + 0.1
1,514,649 + 0.4
1,514,650 - 0.1
1,514,653 + -0.3
1,514,673 + -0.4
1,514,677 - 0.1
1,514,697 - -0.7
1,514,699 + -0.5
1,514,729 - -0.0
1,514,771 - 0.3
1,514,772 - 0.9
1,514,779 - 0.7
1,514,781 + 0.9
1,514,783 - 0.4
1,514,783 - 0.2
1,514,785 + 0.3
1,514,786 + -0.0
1,514,788 + -0.1
1,514,793 - -0.4
1,514,810 - -0.4
1,514,811 - -0.2
1,514,812 - 0.2
1,514,821 + 0.8
1,514,952 + -0.2