Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6683

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6682: 15050 - HMMPfam-Roadblock/LC7 domain-PF03259,SMART-Roadblock/LC7 domain-SM00960,SUPERFAMILY--SSF103196, at 1433664 to 1434403 15050 mRNA_6683: 15051 - HMMPfam-Thioesterase-like superfamily-PF13622, at 1434611 to 1435976 15051 mRNA_6684: 15052 - K04464 MAPK7 mitogen-activated protein kinase 7, at 1436143 to 1438277 15052

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,433,625 + -0.6
1,434,460 - 1.9
1,434,484 - 0.2
1,434,493 - 2.2
1,434,493 - -0.6
1,434,494 + -0.9
1,434,507 - -0.2
1,434,515 + -0.4
1,434,524 + -3.8
1,434,536 - 0.3
1,434,539 + 0.6
1,434,539 - 0.5
1,434,540 + -0.5
1,434,542 + -0.2
1,434,542 - 1.3
1,434,543 - 0.6
1,434,544 + -0.2
1,434,544 + 0.9
1,434,544 + -0.4
1,434,549 + -0.7
1,434,552 - 0.6
1,434,562 + 1.1
1,434,694 - 0.7
1,434,705 - 0.1
1,434,707 - -0.2
1,434,719 - -0.1
1,434,818 + 15051 mRNA_6683 0.15 -0.4
1,434,823 - 15051 mRNA_6683 0.16 0.3
1,434,828 - 15051 mRNA_6683 0.16 -0.9
1,434,832 + 15051 mRNA_6683 0.16 -1.1
1,434,832 + 15051 mRNA_6683 0.16 2.2
1,434,848 + 15051 mRNA_6683 0.17 -0.1
1,434,989 + 15051 mRNA_6683 0.28 -1.8
1,434,993 - 15051 mRNA_6683 0.28 0.7
1,435,128 - 15051 mRNA_6683 0.38 0.6
1,435,135 + 15051 mRNA_6683 0.38 -1.8
1,435,427 + 15051 mRNA_6683 0.60 -0.3
1,435,554 + 15051 mRNA_6683 0.69 -1.0
1,435,571 - 15051 mRNA_6683 0.70 -1.4
1,435,718 - 15051 mRNA_6683 0.81 -0.6
1,435,852 - -0.1
1,435,884 + -2.1
1,435,992 + -1.1
1,436,136 - -0.5
1,436,199 + 0.2
1,436,448 + 15052 mRNA_6684 0.14 -0.5
1,436,689 - 15052 mRNA_6684 0.26 -1.9
1,436,692 + 15052 mRNA_6684 0.26 -0.3
1,436,779 + 15052 mRNA_6684 0.30 -0.1
1,436,921 + 15052 mRNA_6684 0.36 1.0