Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6590

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6589: 14957 - K12386 CTNS cystinosin, at 1169958 to 1171396 14957 mRNA_6590: 14958 - K03009 RPB12, POLR2K DNA-directed RNA polymerases I, II, and III subunit RPABC4, at 1171853 to 1172203 14958 mRNA_6591: 14959 - K05724 FGD5_6 FYVE, RhoGEF and PH domain containing 5/6, at 1172808 to 1176820 14959

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,170,889 + 14957 mRNA_6589 0.65 0.3
1,171,027 - 14957 mRNA_6589 0.74 0.2
1,171,056 + 14957 mRNA_6589 0.76 -0.5
1,171,201 - 14957 mRNA_6589 0.86 -0.9
1,171,326 - -0.9
1,171,340 - 0.2
1,171,356 - 0.0
1,171,475 + 0.5
1,171,486 - 1.0
1,171,637 - 0.2
1,172,116 + 14958 mRNA_6590 0.75 0.7
1,172,517 + -0.7
1,172,537 + 0.5
1,172,570 - 0.0
1,172,656 - -0.6
1,172,662 + -0.8
1,172,668 - -0.5
1,172,675 - 0.5
1,172,680 + -0.8
1,172,835 + -0.0
1,172,853 + -1.5
1,173,005 - -0.2
1,173,022 + 0.4