Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6552

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6551: 14919 - ProSiteProfiles-Zinc finger CCHC-type profile.-PS50158,SMART-zinc finger-SM00343,SUPERFAMILY--SSF57756, at 1073941 to 1075191 14919 mRNA_6552: 14920 - K03127 TAF13 transcription initiation factor TFIID subunit 13, at 1075632 to 1076180 14920

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,074,933 - 14919 mRNA_6551 0.79 -0.5
1,075,056 + 14919 mRNA_6551 0.89 -0.5
1,075,179 - 0.2
1,075,205 - -1.8
1,075,247 + -0.5
1,075,368 - -1.2
1,075,376 + -0.4
1,075,377 - 1.1
1,075,384 - 0.9
1,075,387 - 0.1
1,075,388 - 0.2
1,075,392 - -0.1
1,075,392 - -0.9
1,075,393 + -0.3
1,075,401 + 0.3
1,075,902 - 14920 mRNA_6552 0.49 -1.5
1,075,974 + 14920 mRNA_6552 0.62 -1.1
1,075,993 + 14920 mRNA_6552 0.66 0.5
1,076,119 + 14920 mRNA_6552 0.89 0.0
1,076,147 - -0.1
1,076,556 - 0.2