Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6538

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6537: 14905 - Hypothetical Protein, at 1025496 to 1027566 14905 mRNA_6538: 14906 - BLAST AGC/AKT protein kinase [Microbotryum lychnidis-dioica..., at 1027896 to 1028222 14906 mRNA_6539: 14907 - K19800 SCH9 serine/threonine protein kinase SCH9, at 1028539 to 1031379 14907

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,027,081 - 14905 mRNA_6537 0.77 -1.2
1,027,091 + 14905 mRNA_6537 0.77 -0.0
1,027,094 - 14905 mRNA_6537 0.77 -0.6
1,027,107 - 14905 mRNA_6537 0.78 0.9
1,027,212 + 14905 mRNA_6537 0.83 -0.3
1,027,385 - 0.2
1,027,394 - 0.0
1,027,412 - 0.5
1,027,520 + 0.1
1,027,536 - -0.8
1,027,665 + 0.5
1,027,688 - -0.6
1,027,690 + 0.3
1,027,690 - 0.3
1,027,690 + -0.8
1,027,697 + 1.3
1,027,710 + 0.3
1,027,710 + 0.2
1,027,842 - 0.8
1,027,850 + 0.6
1,027,855 + 0.3
1,027,860 - 0.9
1,028,000 + 14906 mRNA_6538 0.32 1.1
1,028,008 - 14906 mRNA_6538 0.34 1.5
1,028,009 + 14906 mRNA_6538 0.35 0.9
1,028,031 + 14906 mRNA_6538 0.41 0.6
1,028,033 + 14906 mRNA_6538 0.42 1.5
1,028,140 + 14906 mRNA_6538 0.75 -1.0
1,028,148 + 14906 mRNA_6538 0.77 0.3
1,028,154 + 14906 mRNA_6538 0.79 0.7
1,028,159 - 14906 mRNA_6538 0.80 0.7
1,028,179 - 14906 mRNA_6538 0.87 1.6
1,028,297 - 0.2
1,028,300 - 0.9
1,028,307 + 1.0
1,028,311 + 0.9
1,028,312 + -0.3
1,028,313 + 1.1
1,028,486 + 1.0
1,028,598 + 0.9
1,029,002 - 14907 mRNA_6539 0.16 1.2