Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6532

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6531: 14899 - K19940 SEC2 Rab guanine nucleotide exchange factor SEC2, at 1011977 to 1014833 14899 mRNA_6532: 14900 - K11352 NDUFA12 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12, at 1015408 to 1016084 14900 mRNA_6533: 14901 - Hypothetical Protein, at 1016607 to 1018087 14901

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,014,441 + 14899 mRNA_6531 0.86 -1.6
1,014,591 - -1.3
1,014,743 + 2.5
1,014,750 - 2.3
1,014,887 - -1.4
1,014,894 - -0.8
1,014,904 - 1.0
1,014,905 + -1.6
1,015,042 - -0.9
1,015,043 - 1.5
1,015,045 + -0.9
1,015,066 - 1.9
1,015,072 + 0.3
1,015,087 - -0.4
1,015,097 - 0.4
1,015,197 + -0.0
1,015,214 - -0.1
1,015,344 + 0.2
1,015,494 - 14900 mRNA_6532 0.13 -0.9
1,015,516 + 14900 mRNA_6532 0.16 -2.4
1,015,649 - 14900 mRNA_6532 0.36 -0.6
1,015,660 + 14900 mRNA_6532 0.37 -0.5
1,016,975 + 14901 mRNA_6533 0.25 -1.3