Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6456

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6455: 14823 - KOG0039 Ferric reductase, NADH/NADPH oxidase and related proteins, at 829918 to 832599 14823 mRNA_6456: 14824 - KOG3386 Copper transporter, at 832963 to 833757 14824 mRNA_6457: 14825 - Hypothetical Protein, at 833906 to 834580 14825

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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832,226 + 14823 mRNA_6455 0.86 0.8
832,233 + 14823 mRNA_6455 0.86 0.5
832,326 + 14823 mRNA_6455 0.90 -0.1
832,462 + 0.3
832,466 - 0.6
832,478 + -1.1
832,642 + 0.7
832,749 + 0.1
832,763 - 0.1
832,766 - 0.0
832,771 + -1.0
832,775 + -0.3
832,794 + -0.2
832,810 - -2.1
832,949 + 0.6
832,962 + -0.5
833,533 + 14824 mRNA_6456 0.72 -0.7
833,853 + -0.0
833,933 - -0.5
834,134 + 14825 mRNA_6457 0.34 1.9
834,448 + 14825 mRNA_6457 0.80 -0.0
834,545 - -0.2
834,548 + 0.4