Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6407

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6406: 14774 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 736897 to 739297 14774 mRNA_6407: 14775 - HMMPfam-Protein of unknown function (DUF952)-PF06108,SUPERFAMILY--SSF56399, at 739479 to 740196 14775 mRNA_6408: 14776 - K19308 BMT6 25S rRNA (uracil2843-N3)-methyltransferase, at 740308 to 741629 14776

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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738,884 + 14774 mRNA_6406 0.83 -0.4
739,231 + 1.4
739,509 + -0.5
739,858 - 14775 mRNA_6407 0.53 -1.0
739,922 + 14775 mRNA_6407 0.62 -0.2
740,097 + 14775 mRNA_6407 0.86 -0.1
740,109 + 14775 mRNA_6407 0.88 0.2
740,118 + 14775 mRNA_6407 0.89 -0.6
740,245 + -0.1
740,256 + -1.2
740,536 + 14776 mRNA_6408 0.17 0.5
740,658 + 14776 mRNA_6408 0.26 0.6
740,682 + 14776 mRNA_6408 0.28 -0.3
740,829 - 14776 mRNA_6408 0.39 -0.6
741,116 + 14776 mRNA_6408 0.61 -0.8
741,148 + 14776 mRNA_6408 0.64 -0.0