Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6387

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6386: 14754 - KOG3043 Predicted hydrolase related to dienelactone hydrolase, at 690611 to 691768 14754 mRNA_6387: 14755 - Hypothetical Protein, at 692168 to 693043 14755 mRNA_6388: 14756 - HMMPfam-BRCA1 C Terminus (BRCT) domain-PF00533,ProSiteProfiles-BRCT domain profile.-PS50172,SUPERFAMILY--SSF52113, at 693931 to 695622 14756

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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691,237 - 14754 mRNA_6386 0.54 0.7
691,448 - 14754 mRNA_6386 0.72 -0.7
691,592 + 14754 mRNA_6386 0.85 -1.4
692,023 + 0.3
692,279 - 14755 mRNA_6387 0.13 -0.2
692,818 - 14755 mRNA_6387 0.74 -0.5
692,980 - 0.2
693,174 + 1.5
693,265 - -2.0
693,410 - -0.2
693,412 + -0.1
693,436 + -1.1
693,440 - 0.3
693,443 - -0.9
693,569 + -0.6
693,597 + -0.2
693,735 - -0.3
693,748 + -1.3
693,872 + -1.9
693,874 - 0.5
693,885 + -2.4
693,890 + 0.0
693,891 - 0.4