Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6359

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6359: 14727 - KOG1812 Predicted E3 ubiquitin ligase, at 630775 to 633081 14727 mRNA_6360: 14728 - K17790 TIM22 mitochondrial import inner membrane translocase subunit TIM22, at 633743 to 634504 14728

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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629,794 + 0.2
629,797 + -0.7
629,809 - -0.0
629,812 - 0.3
629,827 - -0.2
629,842 - 0.1
629,850 + 1.5
629,858 - 0.1
629,859 + 0.4
629,864 + -0.4
629,893 - 0.1
629,899 + -0.6
629,902 + -0.2
629,903 - -0.6
629,911 + -0.0
629,917 - -0.2
629,919 - 0.7
629,926 + 1.0
629,956 + -0.2
629,958 + -0.3
629,959 - -0.2
629,976 - -0.4
629,984 + -1.2
629,985 + -0.5
630,000 - -0.3
630,003 + -0.0
630,004 + 0.5
630,008 + -0.9
630,010 + -0.1
630,013 - -0.0
630,024 + 0.4
630,036 - 0.0
630,040 - 0.5
630,041 + -0.2
630,056 - -1.5
630,064 - -0.4
630,159 + -1.2
630,165 - 0.1
630,169 - -0.8
630,183 + -0.8
630,198 - 1.8
630,220 + 0.4
630,234 + -0.2
630,280 + 1.0
630,281 + 1.0
630,285 - 0.3
630,312 - -0.6
630,325 + -1.5
630,343 - -0.3
630,351 + -0.5
630,355 - 1.6
630,355 - -0.4
630,362 - -0.1
630,373 - 0.3
630,375 + 0.3
630,376 - 0.2
630,376 - 1.1
630,379 + -1.4
630,390 + 0.2
630,397 - 1.2
630,446 + -0.1
630,459 - -1.6
630,542 + -0.7
630,588 - 0.5
630,604 - 0.0
630,984 - 0.3
631,191 - 14727 mRNA_6359 0.18 1.1
631,271 - 14727 mRNA_6359 0.21 0.0
631,301 - 14727 mRNA_6359 0.23 0.6
631,310 + 14727 mRNA_6359 0.23 0.2
631,622 + 14727 mRNA_6359 0.37 -0.7
631,798 - 14727 mRNA_6359 0.44 0.7
632,038 - 14727 mRNA_6359 0.55 0.2
632,184 + 14727 mRNA_6359 0.61 -0.5
632,207 + 14727 mRNA_6359 0.62 0.1
632,533 - 14727 mRNA_6359 0.76 -0.4
632,673 - 14727 mRNA_6359 0.82 -2.0
632,771 - 14727 mRNA_6359 0.87 0.2
632,903 + -0.4
632,915 - -0.3
632,951 + -0.4
633,227 - -0.3
633,239 + 0.2
633,350 + -0.3
633,352 - -1.1
633,363 - -0.3
633,368 - -1.2
633,377 + 0.5
633,508 + -0.1
633,508 - -0.4
633,682 - 0.2
633,762 - -1.5