Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6305

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6305: 14673 - HMMPfam-FAM72 protein-PF14976,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028, at 485457 to 486370 14673

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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484,457 + 0.2
484,489 - -1.6
484,504 - -0.1
484,505 + -0.5
484,520 + 0.7
484,523 + -0.7
484,629 - -0.1
484,650 - 0.6
484,660 + -0.1
484,660 - 0.3
484,666 - -2.4
484,673 - -1.3
484,711 + -0.4
484,724 + -1.3
484,756 + -0.5
484,758 + 0.0
484,758 + -0.4
484,773 - -0.1
484,773 - -0.8
484,774 + 0.2
484,781 + -0.2
484,792 - 0.1
484,793 - -0.6
484,868 + 0.2
484,882 + 0.4
485,372 - -1.0
485,931 - 14673 mRNA_6305 0.52 0.9
486,122 + 14673 mRNA_6305 0.73 -0.1
486,333 - -0.8
486,381 + 1.4
486,423 - -0.6
486,426 - -0.0
486,564 - 0.2
486,641 + -0.0
486,657 - -0.5
486,779 - -0.5
486,782 - -3.4
486,812 + -0.8
486,957 + 0.3
486,962 - 0.0
486,963 + -0.4
486,980 - 1.3
486,981 + 1.2
487,111 + 1.1
487,247 - -0.3