Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6241

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6241: 14609 - Hypothetical Protein, at 333735 to 334704 14609 mRNA_6242: 14610 - K00826 E2.6.1.42, ilvE branched-chain amino acid aminotransferase, at 335352 to 337546 14610

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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332,817 - 0.7
332,910 - -1.9
333,145 + -0.0
333,148 - -0.7
333,174 + -0.0
333,260 + -0.6
333,304 - -0.5
333,305 + -0.8
333,315 + -0.4
333,342 - 1.8
333,344 - -1.1
333,354 - -0.1
333,356 + 1.3
333,436 - 0.4
333,469 - -2.1
333,495 + 1.3
333,508 + -0.7
333,557 + -0.9
333,565 + -0.3
333,573 - -0.4
333,578 - -0.2
333,580 - -1.5
333,584 - 0.1
333,590 - 0.1
333,592 - -0.3
333,594 - -0.3
333,600 - -1.4
333,602 + -0.2
333,604 + 0.1
333,606 + -0.3
333,607 + 0.0
333,613 - -0.2
333,619 - -0.5
333,623 - 0.2
333,629 + -1.2
333,629 + 1.0
333,629 + 0.8
333,633 - -1.0
333,643 - -1.1
333,646 + -0.1
333,771 - -0.8
333,772 - -0.3
333,782 - -0.5
333,800 + 0.5
333,808 - 0.3
333,951 - 14609 mRNA_6241 0.22 -0.4
333,961 + 14609 mRNA_6241 0.23 0.6
333,963 + 14609 mRNA_6241 0.24 0.2
333,976 - 14609 mRNA_6241 0.25 -1.1
334,089 + 14609 mRNA_6241 0.36 0.3
334,104 - 14609 mRNA_6241 0.38 0.1
334,114 + 14609 mRNA_6241 0.39 0.9
334,261 + 14609 mRNA_6241 0.54 -0.9
334,402 + 14609 mRNA_6241 0.69 -1.1
334,534 - 14609 mRNA_6241 0.82 0.1
334,682 + 0.6
334,682 - -1.2
334,705 + -0.5
334,938 + -0.4
335,105 - -0.2
335,214 + -0.1
335,268 - -1.7
335,289 - -0.1
335,292 + -0.5
335,384 + 0.2
335,432 - -0.2
335,433 + -0.7
335,494 + -1.0
335,574 - 14610 mRNA_6242 0.10 -0.9
335,597 + 14610 mRNA_6242 0.11 -1.3