Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6106

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6106: 14474 - K08332 VAC8 vacuolar protein 8, at 223 to 3658 14474 mRNA_6107: 14475 - K14401 CPSF1, CFT1 cleavage and polyadenylation specificity factor subunit 1, at 3990 to 10005 14475

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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39 + 0.3
39 + -2.8
40 + -0.1
40 + 1.4
40 + 0.1
41 + -0.7
56 + -0.4
56 + -0.4
56 + 0.6
58 + 1.3
59 + -0.4
59 + -2.5
62 - 0.1
65 - 1.1
77 + -1.2
84 + -0.4
102 + -0.6
137 + -1.2
151 + -0.4
200 + 0.1
208 + 0.1
216 + -0.5
229 + 0.2
348 - -0.2
430 + -0.8
498 - -1.1
502 - -2.5
685 + 14474 mRNA_6106 0.13 -1.5
747 + 14474 mRNA_6106 0.15 -0.6
755 + 14474 mRNA_6106 0.15 -0.5
946 + 14474 mRNA_6106 0.21 -1.7
975 + 14474 mRNA_6106 0.22 -0.6
1,245 + 14474 mRNA_6106 0.30 -1.5
2,125 + 14474 mRNA_6106 0.55 -0.1
2,839 - 14474 mRNA_6106 0.76 0.3
3,125 - 14474 mRNA_6106 0.84 0.4
3,248 - 14474 mRNA_6106 0.88 1.3
3,570 + 0.2
3,665 + -0.7
3,692 + -0.8
3,706 + -0.1
3,726 + 0.9
3,820 + -0.8
3,853 + -0.0
3,859 + -0.4
3,909 - -0.2
3,929 - 0.2