Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6078

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6077: 14445 - KOG3869 Uncharacterized conserved protein, at 1590853 to 1592368 14445 mRNA_6078: 14446 - HMMPfam-Essential protein Yae1, N terminal-PF09811, at 1592607 to 1593994 14446 mRNA_6079: 14447 - K12776 MEK1 meiosis-specific serine/threonine-protein kinase MEK1, at 1594108 to 1596398 14447

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,592,327 - 0.0
1,592,363 + -2.8
1,592,409 + 1.5
1,592,412 + 1.7
1,592,450 - -0.3
1,592,455 - 0.2
1,592,829 - 14446 mRNA_6078 0.16 0.7
1,592,832 - 14446 mRNA_6078 0.16 -0.9
1,592,950 + 14446 mRNA_6078 0.25 0.0
1,592,974 + 14446 mRNA_6078 0.26 1.3
1,592,992 + 14446 mRNA_6078 0.28 0.6
1,593,044 + 14446 mRNA_6078 0.31 1.1
1,594,101 - -1.4
1,594,334 - 0.6
1,594,381 + 14447 mRNA_6079 0.12 0.4
1,594,385 - 14447 mRNA_6079 0.12 0.3
1,594,442 + 14447 mRNA_6079 0.15 0.2
1,594,444 + 14447 mRNA_6079 0.15 -1.2
1,594,489 - 14447 mRNA_6079 0.17 0.0
1,594,505 - 14447 mRNA_6079 0.17 -1.4
1,594,506 + 14447 mRNA_6079 0.17 0.1
1,594,626 - 14447 mRNA_6079 0.23 0.9
1,594,708 + 14447 mRNA_6079 0.26 -0.3
1,594,710 - 14447 mRNA_6079 0.26 -1.2
1,594,803 - 14447 mRNA_6079 0.30 -1.0
1,594,829 + 14447 mRNA_6079 0.31 1.1
1,594,924 + 14447 mRNA_6079 0.36 -0.9