Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5974

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5972: 14340 - K03243 EIF5B translation initiation factor 5B, at 1355069 to 1359492 14340 mRNA_5973: 14341 - Hypothetical Protein, at 1359624 to 1360109 14341 mRNA_5974: 14342 - SUPERFAMILY--SSF54909, at 1360106 to 1360539 14342 mRNA_5975: 14343 - K14636 SLC18A3, VACHT MFS transporter, DHA1 family, solute carrier family 18 (vesicular acetylcholine transporter), member 3, at 1361032 to 1363169 14343

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,360,023 + 14341 mRNA_5973 0.82 -0.1
1,360,421 - 14342 mRNA_5974 0.73 0.1
1,360,444 - 14342 mRNA_5974 0.78 -0.6
1,360,456 + 14342 mRNA_5974 0.81 0.8
1,360,469 - 14342 mRNA_5974 0.84 -0.7
1,360,478 + 14342 mRNA_5974 0.86 0.1
1,360,596 + 0.1
1,360,598 + 0.1
1,360,601 - -3.1
1,360,612 + -1.1
1,360,625 - -0.2
1,360,631 + -1.4
1,360,631 + -1.0
1,360,633 + 1.1
1,360,634 + -0.0
1,360,639 - -0.7
1,360,645 - -1.2
1,360,649 + -1.3
1,360,650 + 0.4
1,360,778 - 0.1
1,360,780 - 0.7
1,360,785 - 0.5
1,360,797 - 0.3
1,360,799 + 0.7
1,360,812 + 0.3
1,360,821 - -1.4
1,360,822 + -0.1
1,360,831 - -1.6
1,360,833 - -0.6
1,360,964 - 0.5
1,361,016 - 0.4
1,361,096 + -0.2
1,361,099 - 0.5
1,361,132 + 0.5
1,361,404 - 14343 mRNA_5975 0.17 1.2
1,361,413 - 14343 mRNA_5975 0.18 0.3
1,361,415 + 14343 mRNA_5975 0.18 -0.6
1,361,525 - 14343 mRNA_5975 0.23 0.2