Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5919

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5918: 14286 - K11498 CENPE centromeric protein E, at 1241220 to 1242760 14286 mRNA_5919: 14287 - KOG1836 Extracellular matrix glycoprotein Laminin subunits alpha and gamma, at 1243346 to 1244488 14287 mRNA_5920: 14288 - K03022 RPC8, POLR3H DNA-directed RNA polymerase III subunit RPC8, at 1245035 to 1246181 14288

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,242,969 - -1.2
1,243,026 + -1.0
1,243,258 + -1.1
1,243,326 + -0.1
1,243,356 - -0.1
1,243,582 - 14287 mRNA_5919 0.21 -0.5
1,243,609 + 14287 mRNA_5919 0.23 -1.2
1,243,670 + 14287 mRNA_5919 0.28 -2.0
1,244,004 + 14287 mRNA_5919 0.58 -0.4
1,244,006 - 14287 mRNA_5919 0.58 0.1
1,244,332 + 14287 mRNA_5919 0.86 -0.5
1,244,547 - -0.1
1,244,817 + -0.1