Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5875

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5874: 14242 - K04536 GNB1 guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, at 1138140 to 1139450 14242 mRNA_5875: 14243 - Hypothetical Protein, at 1139653 to 1140264 14243

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,139,104 + 14242 mRNA_5874 0.74 1.1
1,139,250 + 14242 mRNA_5874 0.85 0.3
1,139,408 - -0.4
1,139,530 - 0.5
1,139,534 + 0.1
1,139,544 - -1.6
1,139,544 + 0.0
1,139,554 + -1.4
1,139,582 - 0.3
1,139,640 - 0.6
1,139,679 - 0.4
1,139,718 + 14243 mRNA_5875 0.11 -0.1
1,139,719 - 14243 mRNA_5875 0.11 0.2
1,139,723 + 14243 mRNA_5875 0.11 0.8
1,139,724 + 14243 mRNA_5875 0.12 0.7
1,139,726 - 14243 mRNA_5875 0.12 0.8
1,139,754 + 14243 mRNA_5875 0.17 0.5
1,139,845 + 14243 mRNA_5875 0.31 1.0
1,139,860 - 14243 mRNA_5875 0.34 0.0
1,139,863 - 14243 mRNA_5875 0.34 0.1
1,139,867 - 14243 mRNA_5875 0.35 -1.1
1,139,868 - 14243 mRNA_5875 0.35 0.7
1,139,873 + 14243 mRNA_5875 0.36 -1.6
1,139,994 + 14243 mRNA_5875 0.56 0.1
1,140,013 + 14243 mRNA_5875 0.59 0.3
1,140,014 - 14243 mRNA_5875 0.59 0.1
1,140,018 - 14243 mRNA_5875 0.60 0.9
1,140,018 + 14243 mRNA_5875 0.60 -1.7
1,140,022 - 14243 mRNA_5875 0.60 0.7
1,140,022 + 14243 mRNA_5875 0.60 -0.5
1,140,023 - 14243 mRNA_5875 0.60 1.3
1,140,035 - 14243 mRNA_5875 0.62 -0.4
1,140,046 + 14243 mRNA_5875 0.64 0.6
1,140,049 + 14243 mRNA_5875 0.65 -0.0
1,140,140 - 14243 mRNA_5875 0.80 -0.1
1,140,144 + 14243 mRNA_5875 0.80 1.0
1,140,170 + 14243 mRNA_5875 0.84 0.1
1,140,178 - 14243 mRNA_5875 0.86 1.4
1,140,178 - 14243 mRNA_5875 0.86 0.0
1,140,182 + 14243 mRNA_5875 0.86 -0.1
1,140,191 - 14243 mRNA_5875 0.88 0.0
1,140,196 + 14243 mRNA_5875 0.89 -0.5
1,140,196 + 14243 mRNA_5875 0.89 0.6
1,140,198 - 14243 mRNA_5875 0.89 -0.6
1,140,199 + 14243 mRNA_5875 0.89 1.1
1,140,201 - 14243 mRNA_5875 0.90 0.3
1,140,205 + -0.3
1,140,206 - 0.7
1,140,207 + 0.1
1,140,209 + -0.3
1,140,209 + 0.7
1,140,221 - -0.4
1,140,224 - 0.9
1,140,227 - 0.4
1,140,361 + 1.8
1,140,392 + -0.4
1,140,443 - -0.9
1,140,462 - -0.2
1,140,487 + 0.5
1,140,489 + -2.0
1,140,490 - 0.2
1,140,491 + -0.8
1,140,496 + -0.1
1,140,497 - 0.6
1,140,507 + -1.5
1,140,508 + 1.2
1,140,516 - -0.8
1,140,519 + 0.4
1,140,521 + -0.3
1,140,526 + 0.1
1,140,558 - 0.3
1,140,565 - 0.6
1,140,565 + 0.2
1,140,566 - 1.4
1,140,573 + -0.6
1,140,573 + -1.8
1,140,576 - -0.1
1,140,578 - 0.1
1,140,585 - -0.0
1,140,586 - 0.4
1,140,586 + -0.1
1,140,589 - -0.4
1,140,589 - -0.2
1,140,593 + -0.4
1,140,595 - -0.2
1,140,599 - 0.0
1,140,611 + -0.1
1,140,630 - -2.3
1,140,648 - -1.2
1,140,653 + -0.6
1,140,655 + 0.2
1,140,660 + -0.4
1,140,687 + -2.4
1,140,690 + -0.2
1,140,898 + -0.2
1,141,075 + -0.6
1,141,077 - -2.0
1,141,112 - -1.3
1,141,112 - 1.6
1,141,118 - -0.1
1,141,118 - 0.2
1,141,130 - 0.8
1,141,130 - 0.3
1,141,139 - -0.0
1,141,140 - -0.7