Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5860

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5859: 14227 - BLAST probable atp-binding cassette transporter [Ceraceosor..., at 1104171 to 1104734 14227 mRNA_5860: 14228 - K19770 RNASEK ribonuclease kappa, at 1104948 to 1105402 14228 mRNA_5861: 14229 - K16261 YAT yeast amino acid transporter, at 1105736 to 1108814 14229

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,104,003 - -0.3
1,104,941 - 0.2
1,104,944 + -0.2
1,105,054 - 14228 mRNA_5860 0.23 0.1
1,105,092 + 14228 mRNA_5860 0.32 -0.8
1,105,254 + 14228 mRNA_5860 0.67 0.2
1,105,380 - -0.0
1,105,384 + 0.6
1,105,389 - 0.2
1,105,513 - 1.5
1,105,961 + 0.5
1,106,062 - 14229 mRNA_5861 0.11 0.6
1,106,085 + 14229 mRNA_5861 0.11 1.9
1,106,095 + 14229 mRNA_5861 0.12 -0.3
1,106,377 + 14229 mRNA_5861 0.21 -1.0
1,106,378 - 14229 mRNA_5861 0.21 0.1