Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5855

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5854: 14222 - K12826 SF3A2, SAP62 splicing factor 3A subunit 2, at 1093041 to 1094048 14222 mRNA_5855: 14223 - Hypothetical Protein, at 1094294 to 1098449 14223 mRNA_5856: 14224 - K03357 APC10, DOC1 anaphase-promoting complex subunit 10, at 1098956 to 1099820 14224

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,095,028 - 14223 mRNA_5855 0.18 0.0
1,095,036 + 14223 mRNA_5855 0.18 0.6
1,095,066 + 14223 mRNA_5855 0.19 -1.1
1,095,066 + 14223 mRNA_5855 0.19 -0.2
1,095,611 + 14223 mRNA_5855 0.32 -0.7
1,096,919 - 14223 mRNA_5855 0.63 0.6
1,097,538 + 14223 mRNA_5855 0.78 -0.1
1,098,003 + 14223 mRNA_5855 0.89 -1.1
1,098,091 - 0.4
1,098,249 - 0.6
1,098,263 + -1.2
1,098,556 - -1.1
1,098,577 + -0.1
1,098,976 - -0.9
1,098,983 + -1.1
1,099,109 - 14224 mRNA_5856 0.18 -0.2
1,099,123 - 14224 mRNA_5856 0.19 0.5
1,099,257 - 14224 mRNA_5856 0.35 -1.0
1,099,289 + 14224 mRNA_5856 0.38 -1.0
1,099,409 + 14224 mRNA_5856 0.52 -0.6
1,099,424 + 14224 mRNA_5856 0.54 0.6
1,099,424 + 14224 mRNA_5856 0.54 -1.0