Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5827

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5826: 14194 - SUPERFAMILY--SSF52047, at 1033678 to 1034925 14194 mRNA_5827: 14195 - K04518 pheA2 prephenate dehydratase, at 1035308 to 1036218 14195 mRNA_5828: 14196 - KOG0725 Reductases with broad range of substrate specificities, at 1036637 to 1037941 14196

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,034,571 + 14194 mRNA_5826 0.72 -0.6
1,034,589 - 14194 mRNA_5826 0.73 1.6
1,034,853 - -0.3
1,035,013 + -1.2
1,035,439 - 14195 mRNA_5827 0.14 -2.9
1,035,575 - 14195 mRNA_5827 0.29 -4.7
1,035,582 - 14195 mRNA_5827 0.30 -3.6
1,035,617 - 14195 mRNA_5827 0.34 -0.7
1,035,628 + 14195 mRNA_5827 0.35 -2.3
1,035,756 + 14195 mRNA_5827 0.49 -2.3
1,035,780 + 14195 mRNA_5827 0.52 -3.7
1,035,895 + 14195 mRNA_5827 0.64 -1.5
1,036,186 + -1.3
1,036,287 - 0.9
1,036,300 - 0.5
1,036,310 - 0.8
1,036,326 - 0.8
1,036,333 - -0.9
1,036,463 - 0.1
1,036,605 - -1.3
1,036,622 + -1.1
1,036,644 - 0.5
1,036,645 + 0.7
1,036,645 + -0.1
1,036,778 + 14196 mRNA_5828 0.11 -0.0
1,037,218 + 14196 mRNA_5828 0.45 -0.0