Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5737

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5736: 14104 - K03250 EIF3E, INT6 translation initiation factor 3 subunit E, at 812074 to 813868 14104 mRNA_5737: 14105 - HMMPfam-Arsenite-resistance protein 2-PF04959,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157, at 814354 to 815055 14105 mRNA_5738: 14106 - SUPERFAMILY--SSF54928, at 815382 to 817330 14106

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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814,074 + -0.5
814,080 + 0.0
814,106 + -0.4
814,110 + 0.4
814,117 + 0.5
814,120 + 0.1
814,122 + 0.4
814,213 - -0.4
814,226 - -0.8
814,240 - -0.0
814,244 + 0.4
814,261 - -0.4
814,262 - -0.7
814,374 - -1.2
814,379 + -1.0
814,648 - 14105 mRNA_5737 0.42 -2.8
814,785 - 14105 mRNA_5737 0.61 -0.7
814,951 - 14105 mRNA_5737 0.85 -2.6
815,116 + 0.1
815,144 - -2.4
815,592 - 14106 mRNA_5738 0.11 -1.5