Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5471

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5470: 13838 - K00599 METTL6 methyltransferase-like protein 6, at 168838 to 170246 13838 mRNA_5471: 13839 - KOG4696 Uncharacterized conserved protein, at 170763 to 172785 13839 mRNA_5472: 13840 - K00728 POMT dolichyl-phosphate-mannose-protein mannosyltransferase, at 173167 to 176789 13840

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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170,001 + 13838 mRNA_5470 0.83 1.2
170,307 + 0.1
170,434 - 0.6
170,450 - 0.6
170,579 - -0.2
170,600 - -0.4
170,627 - -0.9
170,647 + 0.7
170,764 - -1.5
171,206 - 13839 mRNA_5471 0.22 -0.1
171,247 + 13839 mRNA_5471 0.24 -0.6
171,584 - 13839 mRNA_5471 0.41 -0.2
171,602 + 13839 mRNA_5471 0.41 0.0
171,620 - 13839 mRNA_5471 0.42 0.2
171,620 + 13839 mRNA_5471 0.42 0.1
171,754 - 13839 mRNA_5471 0.49 0.5
171,854 - 13839 mRNA_5471 0.54 0.1
171,958 + 13839 mRNA_5471 0.59 -1.0
172,476 - 13839 mRNA_5471 0.85 -0.6
172,669 - -0.5
172,775 - -0.4
172,777 + -1.2
172,895 - 1.2
173,051 - -0.4
173,056 - 0.7
173,071 + -1.1
173,072 - -1.0
173,087 - 0.6
173,246 + -0.7
173,318 - -1.6
173,349 - -0.5
173,389 - -0.9