Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5450

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5449: 13817 - HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 117409 to 118509 13817 mRNA_5450: 13818 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 118824 to 121253 13818

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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117,966 + 13817 mRNA_5449 0.51 1.2
117,972 + 13817 mRNA_5449 0.51 0.0
118,025 - 13817 mRNA_5449 0.56 -0.4
118,074 - 13817 mRNA_5449 0.60 0.2
118,099 + 13817 mRNA_5449 0.63 -0.1
118,263 + 13817 mRNA_5449 0.78 0.2
118,367 - 13817 mRNA_5449 0.87 0.6
118,375 - 13817 mRNA_5449 0.88 -1.5
118,392 + 13817 mRNA_5449 0.89 -0.4
118,395 - 13817 mRNA_5449 0.90 0.7
118,395 - 13817 mRNA_5449 0.90 -0.5
118,395 - 13817 mRNA_5449 0.90 2.4
118,401 + -0.3
118,488 - -2.2
118,489 + 0.2
118,831 - -1.9
118,836 + -1.0
118,936 + 0.7
119,291 + 13818 mRNA_5450 0.19 -0.4
119,583 - 13818 mRNA_5450 0.31 -1.3
119,721 - 13818 mRNA_5450 0.37 0.5
119,901 - 13818 mRNA_5450 0.44 -1.1
120,138 - 13818 mRNA_5450 0.54 0.1
120,338 - 13818 mRNA_5450 0.62 -0.1
120,605 + 13818 mRNA_5450 0.73 -0.3
120,775 + 13818 mRNA_5450 0.80 -2.1
120,931 + 13818 mRNA_5450 0.87 1.5
121,143 - -0.8
121,201 - -0.6
121,226 + 0.2
121,317 + -0.2
121,539 - -1.2
121,770 - -0.2
121,785 + -0.0
121,938 + -0.3
122,078 - 0.8
122,080 + -0.2
122,093 - -0.2
122,096 - 0.2
122,116 - 0.0